Information for 6-AGAGGRAGGGCCAGGC (Motif 9)

C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C
Reverse Opposite:
C T A G A G T C A G T C A C G T T A C G C T A G G T A C A G T C A T G C C G A T A G C T A G T C A G T C A C G T A T G C A G C T
p-value:1e-12
log p-value:-2.763e+01
Information Content per bp:1.785
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 14.8bp
Average Position of motif in Background53.7 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAGGRAGGGCCAGGC-
--AAGGKGRCGCAGGCA
 C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T
A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGGRAGGGCCAGGC
AGAGGAAGTG------
 C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGGRAGGGCCAGGC
TGGGGAAGGGCM----
 C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:AGAGGRAGGGCCAGGC--
----------CTAGGCCT
 C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGAGGRAGGGCCAGGC
GGAGAAAGGTGCGA--
 C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGAGGRAGGGCCAGGC---
-----CAGGCCNNGGCCNN
 C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGAGGRAGGGCCAGGC--
------AGGTCAAGGTCA
 C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:AGAGGRAGGGCCAGGC--
----------CNAGGCCT
 C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGGRAGGGCCAGGC
AGAGGAA---------
 C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGAGGRAGGGCCAGGC--
------AGGTCAAGGTCA
 C T G A A T C G C G T A A C T G T A C G T C G A C G T A A T C G C T A G C A T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A