Information for 5-CACACTCATGCCT (Motif 8)

A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T
Reverse Opposite:
C T G A A T C G C T A G A T G C G T C A C A G T T A C G C G T A A T C G A C G T A C T G C G A T C T A G
p-value:1e-12
log p-value:-2.805e+01
Information Content per bp:1.773
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif42.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets61.9 +/- 24.6bp
Average Position of motif in Background53.8 +/- 52.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACACTCATGCCT-
GACCACATTCATACAAT
 A C G T A C G T A C G T A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CACACTCATGCCT
GGCCACACCCAN----
 A C G T A C G T A C G T A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACACTCATGCCT--
-ACATTCATGACACG
 A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACACTCATGCCT
GCCACACCCA-----
 A C G T A C G T A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACACTCATGCCT
AGCCACTCAAG---
 A C G T A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CACACTCATGCCT
GGCCACACCCA-----
 A C G T A C G T A C G T A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CACACTCATGCCT---
-------ATGCCCACC
 A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CACACTCATGCCT-
---NNACTTGCCTT
 A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CACACTCATGCCT---
--AANTCATGCGTGAA
 A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T A C G T A C G T A C G T
A C G T A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CACACTCATGCCT
AASCACTCAA----
 A C G T A G T C C G T A G T A C T G C A A T G C C G A T A T G C G T C A A C G T A T C G A G T C T A G C G A C T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T