Information for 15-ACATTTACAT (Motif 42)

C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C G T
p-value:1e-5
log p-value:-1.205e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 17.8bp
Average Position of motif in Background46.6 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-ACATTTACAT-
CTCATTTGCATW
 A C G T C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:ACATTTACAT-
ATATTTACATA
 C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:ACATTTACAT-
--ATTTGCATA
 C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-ACATTTACAT-
BTVATTWGCATA
 A C G T C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ACATTTACAT--
TTCATTTGCATAT
 A C G T C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU3F1/MA0786.1/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ACATTTACAT--
TAATTTGCATAA
 C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.74
Offset:2
Orientation:forward strand
Alignment:ACATTTACAT--
--ATTTGCATAA
 C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACATTTACAT---
-AATTTGCATANT
 C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ACATTTACAT-
--ATTTGCATA
 C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ACATTTACAT--
--ATTTGCATAT
 C G T A A G T C C G T A A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T