Information for 2-GACAGAGACAGTA (Motif 4)

A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A
Reverse Opposite:
A G C T C G T A G T A C A C G T A C T G A C G T A T G C G C A T A G T C A C G T A C T G A C G T T A G C
p-value:1e-13
log p-value:-3.123e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.7 +/- 22.1bp
Average Position of motif in Background44.7 +/- 1.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GACAGAGACAGTA
GAAAGTGAAAGT-
 A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GACAGAGACAGTA-
AGAAAGTGAAAGTGA
 A C G T A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GACAGAGACAGTA
-CCAGGAACAG--
 A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACAGAGACAGTA
CACAGN-------
 A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACAGAGACAGTA
GAAAGTGAAAGT-
 A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGAGACAGTA---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGACAGTA
TTGACAGC-------
 A C G T A C G T A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGACAGTA
TTGACAG--------
 A C G T A C G T A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GACAGAGACAGTA
TTGACAGG-------
 A C G T A C G T A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGAGACAGTA
NNNNTGCCAGTGATTG--
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A G T C C G T A A C T G C G A T C T G A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T