Information for 23-TGTGYTGGACTGT (Motif 38)

A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T
Reverse Opposite:
T C G A A G T C C G T A A T C G G A C T T A G C G T A C G T C A T C A G A T G C C T G A A T G C G T C A
p-value:1e-6
log p-value:-1.499e+01
Information Content per bp:1.670
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.80%
Number of Background Sequences with motif725.8
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets44.3 +/- 29.0bp
Average Position of motif in Background49.5 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGYTGGACTGT
NNCTTTGTTTTGNTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGTGYTGGACTGT
NNHTGTGGTTWN----
 A C G T A C G T A C G T A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGYTGGACTGT
NNNNTTGTGTGCTTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGYTGGACTGT
NNGCGTGTGTGCNGCN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTGYTGGACTGT
GCTGTGGTTT-----
 A C G T A C G T A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGTGYTGGACTGT-----
NNTGTTCTTTTTTGTTTACT
 A C G T A C G T A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGTGYTGGACTGT
CTGTGGTTTN----
 A C G T A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGTGYTGGACTGT
CTGTTCCTGG----
 A C G T A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TGTGYTGGACTGT
---CCWGGAATGY
 A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T
A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TGTGYTGGACTGT
GTCTGTGGTTT-----
 A C G T A C G T A C G T A C G T A T C G A G C T T A C G A G T C A C G T A C T G A T C G C T G A T A G C G C A T T C A G A G C T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T