Information for 5-AGGTTACGTC (Motif 25)

C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C
Reverse Opposite:
A C T G G T C A T A G C A C T G A C G T C G T A C G T A A G T C A G T C A C G T
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.880
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 23.3bp
Average Position of motif in Background46.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GMEB2/MA0862.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AGGTTACGTC-
---TTACGTAA
 C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

NFIL3/MA0025.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGTTACGTC-
ANGTTACATAA
 C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C A C G T
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGGTTACGTC
AAGGTCAC---
 A C G T C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGGTTACGTC---
---TTACGTCATN
 C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A

Gmeb1/MA0615.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGGTTACGTC------
GAGTGTACGTAAGATGG
 A C G T C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGGTTACGTC------
GAGTGTACGTAAGATGG
 A C G T C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

Creb5/MA0840.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGTTACGTC---
-NGTGACGTCATN
 C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C A C G T A C G T A C G T
A C G T C T A G T C A G C G A T C A T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T A G C T

TEF/MA0843.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGTTACGTC---
-NGTTACGTAATN
 C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C A C G T A C G T A C G T
A C G T A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGGTTACGTC
TACCCTAGTTACCGA
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGTTACGTC-
-GATGACGTCA
 C G T A C T A G A C T G A C G T A C G T C G T A A G T C A T C G A C G T G T A C A C G T
A C G T T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A