Information for 1-CAGBTGGGTGCTGCGT (Motif 2)

A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T
Reverse Opposite:
C G T A A G T C A C T G A T G C C G T A A C T G A G T C C G T A A G T C G T A C A G T C C G T A T A C G G T A C C G A T A C T G
p-value:1e-16
log p-value:-3.729e+01
Information Content per bp:1.828
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.6 +/- 23.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGBTGGGTGCTGCGT
--CGTGGGTGGTCC--
 A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T
A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGBTGGGTGCTGCGT
NNNNTTGTGTGCTTNN-
 A C G T A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGBTGGGTGCTGCGT
----TGGGTGTGGC--
 A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGBTGGGTGCTGCGT
NNGCGTGTGTGCNGCN-
 A C G T A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGBTGGGTGCTGCGT
GCAGCTGTNN-------
 A C G T A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGBTGGGTGCTGCGT
VCAGCTGBNN-------
 A C G T A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGBTGGGTGCTGCGT
CAGGTGAGG-------
 A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CAGBTGGGTGCTGCGT------
-------NTGCTGAGTCATCCN
 A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGBTGGGTGCTGCGT
HCAGCTGDTN-------
 A C G T A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGBTGGGTGCTGCGT
ACAGCTGTTN-------
 A C G T A G T C C G T A A C T G A T G C A C G T A C T G C A T G A C T G A C G T A C T G G T A C A C G T A T C G G T A C C T A G A C G T
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T