Information for 7-ACCKAGCAMGCGR (Motif 13)

C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A
Reverse Opposite:
A G C T A G T C A T C G A G T C A C G T A C G T A C T G A G T C A C G T G T A C A C T G A C T G A C G T
p-value:1e-11
log p-value:-2.533e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 31.8bp
Average Position of motif in Background53.3 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACCKAGCAMGCGR
CCACACAGCAGGAGA
 A C G T A C G T C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACCKAGCAMGCGR
CCACACAGCAGGAGA
 A C G T A C G T C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ACCKAGCAMGCGR
------CACGCA-
 C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ACCKAGCAMGCGR-
----GGCACGCGTC
 C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACCKAGCAMGCGR
CCGCATAGCAACGGA
 A C G T A C G T C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

MAX::MYC/MA0059.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACCKAGCAMGCGR-
---GACCACGTGGT
 C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A A C G T
A C G T A C G T A C G T C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACCKAGCAMGCGR
-CACAGCAGGGGG
 C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACCKAGCAMGCGR
TACCATAGCAACGGT
 A C G T A C G T C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0043.1_Max_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACCKAGCAMGCGR---
CCNNANCACGTGGTCN
 C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A A C G T A C G T A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ACCKAGCAMGCGR----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C A G T C G T A A C T G A G T C C G T A G T C A A C T G A T G C C T A G C T G A A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A