Information for 6-GCCAAGCTCAGTC (Motif 12)

A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G A T A C T G C G T A C T A G A T G C A C G T A C G T A C T G A C T G A G T C
p-value:1e-11
log p-value:-2.608e+01
Information Content per bp:1.941
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.9 +/- 20.0bp
Average Position of motif in Background38.0 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCAAGCTCAGTC
-CAAAGGTCAG--
 A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCAAGCTCAGTC
BTCAAGGTCA---
 A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGCTCAGTC
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGCTCAGTC
TGCCAA--------
 A C G T A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCAAGCTCAGTC
NTCAAGGTCA---
 A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCCAAGCTCAGTC
-TCAAGGTCAN--
 A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGCTCAGTC
GGTGCCAAGT------
 A C G T A C G T A C G T A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGCTCAGTC--
TATTCAAGGTCATGCGA
 A C G T A C G T A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCAAGCTCAGTC
-TCAAGGTCATA-
 A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCAAGCTCAGTC
-TCAAGGTCAT--
 A C T G A G T C A G T C G T C A C G T A A T C G A G T C C G A T A G T C C G T A A C T G A C G T A G T C
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T