Information for 7-CCGCAGCTGC (Motif 9)

A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C
Reverse Opposite:
A C T G A T G C T C G A A C T G A T G C G A C T A T C G G A T C A C T G T C A G
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.502
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif6.23%
Number of Background Sequences with motif964.3
Percentage of Background Sequences with motif2.06%
Average Position of motif in Targets46.4 +/- 26.4bp
Average Position of motif in Background49.3 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.87
Offset:1
Orientation:forward strand
Alignment:CCGCAGCTGC-
-CGCAGCTGCG
 A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CCGCAGCTGC-----
CTCAGCAGCTGCTACTG
 A C G T A C G T A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CCGCAGCTGC
CAGCAGCTGN
 A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CCGCAGCTGC-
NNAGCAGCTGCT
 A C G T A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCGCAGCTGC--
-GACAGCTGCAG
 A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CCGCAGCTGC--
--GCAGCTGTNN
 A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C A C G T A C G T
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCGCAGCTGC-
-AGCAGCTGCT
 A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CCGCAGCTGC-
NNVVCAGCTGBN
 A C G T A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCGCAGCTGC
-ANCAGCTG-
 A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCGCAGCTGC--
-AACAGCTGCAG
 A G T C T G A C C T A G T A G C C T G A T A C G T G A C A G C T T A C G T G A C A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G