Information for 17-SCACYCAGAGYCA (Motif 16)

A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A
Reverse Opposite:
C G A T A C T G C T G A A G T C A C G T G T A C C G A T A C T G C T A G A C T G A C G T A C T G A T C G
p-value:1e-6
log p-value:-1.401e+01
Information Content per bp:1.875
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.7 +/- 16.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--SCACYCAGAGYCA
AGCCACTCAAG----
 A C G T A C G T A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--SCACYCAGAGYCA
MRSCACTYAA-----
 A C G T A C G T A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---SCACYCAGAGYCA
GGACCACCCACG----
 A C G T A C G T A C G T A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:SCACYCAGAGYCA
------TGAGTCA
 A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

FOSL2/MA0478.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:SCACYCAGAGYCA---
-----NTGAGTCATCN
 A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

JUNB/MA0490.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:SCACYCAGAGYCA---
-----ATGAGTCATCN
 A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

FOSL1/MA0477.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:SCACYCAGAGYCA--
----NATGAGTCACC
 A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:SCACYCAGAGYCA-
----GATGAGTCAT
 A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SCACYCAGAGYCA
-CACGCA------
 A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--SCACYCAGAGYCA
AASCACTCAA-----
 A C G T A C G T A T G C A G T C C G T A A G T C G A T C A G T C C G T A A C T G C G T A A C T G A G C T A G T C C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T