Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 809)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 28763)	% of Background Sequences with Motif
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-98	-2.279e+02	0.0000	228.0	28.18%	1492.8	5.19%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-96	-2.217e+02	0.0000	187.0	23.11%	967.7	3.36%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-86	-1.996e+02	0.0000	177.0	21.88%	972.8	3.38%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-83	-1.926e+02	0.0000	181.0	22.37%	1072.2	3.73%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-66	-1.527e+02	0.0000	200.0	24.72%	1710.4	5.94%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-59	-1.377e+02	0.0000	223.0	27.56%	2320.5	8.06%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-57	-1.322e+02	0.0000	236.0	29.17%	2663.6	9.25%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-51	-1.189e+02	0.0000	196.0	24.23%	2042.9	7.10%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-51	-1.178e+02	0.0000	165.0	20.40%	1477.4	5.13%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-50	-1.152e+02	0.0000	196.0	24.23%	2094.0	7.28%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-47	-1.105e+02	0.0000	159.0	19.65%	1455.0	5.06%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-40	-9.333e+01	0.0000	80.0	9.89%	405.0	1.41%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-39	-9.085e+01	0.0000	107.0	13.23%	793.9	2.76%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-39	-8.982e+01	0.0000	123.0	15.20%	1062.3	3.69%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-36	-8.340e+01	0.0000	114.0	14.09%	980.8	3.41%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-34	-7.976e+01	0.0000	121.0	14.96%	1144.0	3.97%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-29	-6.846e+01	0.0000	44.0	5.44%	146.0	0.51%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-26	-6.133e+01	0.0000	97.0	11.99%	945.8	3.29%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-24	-5.756e+01	0.0000	88.0	10.88%	832.7	2.89%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-24	-5.685e+01	0.0000	71.0	8.78%	556.6	1.93%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-23	-5.422e+01	0.0000	57.0	7.05%	372.7	1.29%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-22	-5.243e+01	0.0000	37.0	4.57%	143.0	0.50%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-21	-4.986e+01	0.0000	95.0	11.74%	1071.1	3.72%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-19	-4.422e+01	0.0000	92.0	11.37%	1104.1	3.84%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-15	-3.559e+01	0.0000	100.0	12.36%	1449.7	5.04%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-13	-3.083e+01	0.0000	36.0	4.45%	268.4	0.93%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-7	-1.776e+01	0.0000	45.0	5.56%	624.4	2.17%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-6	-1.559e+01	0.0000	101.0	12.48%	2112.9	7.34%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-5	-1.271e+01	0.0000	23.0	2.84%	264.9	0.92%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-5	-1.257e+01	0.0000	111.0	13.72%	2551.2	8.86%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-5	-1.211e+01	0.0001	32.0	3.96%	465.0	1.62%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-5	-1.202e+01	0.0001	26.0	3.21%	337.4	1.17%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-4	-1.143e+01	0.0001	16.0	1.98%	153.2	0.53%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-4	-1.073e+01	0.0002	31.0	3.83%	476.5	1.66%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-4	-1.043e+01	0.0003	18.0	2.22%	204.3	0.71%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-4	-1.020e+01	0.0004	35.0	4.33%	585.6	2.03%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-4	-1.020e+01	0.0004	91.0	11.25%	2106.1	7.32%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-4	-9.949e+00	0.0005	44.0	5.44%	818.4	2.84%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-4	-9.600e+00	0.0006	26.0	3.21%	390.2	1.36%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-3	-9.146e+00	0.0010	36.0	4.45%	643.3	2.23%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-3	-8.580e+00	0.0017	18.0	2.22%	237.0	0.82%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-3	-8.306e+00	0.0021	38.0	4.70%	724.2	2.52%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-3	-8.030e+00	0.0028	68.0	8.41%	1566.4	5.44%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-3	-7.866e+00	0.0032	22.0	2.72%	342.5	1.19%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-3	-7.824e+00	0.0032	31.0	3.83%	562.9	1.96%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-3	-7.694e+00	0.0036	23.0	2.84%	370.8	1.29%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-3	-7.372e+00	0.0049	26.0	3.21%	452.8	1.57%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e-3	-7.219e+00	0.0056	37.0	4.57%	741.4	2.58%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-3	-7.171e+00	0.0057	13.0	1.61%	160.8	0.56%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-3	-7.111e+00	0.0059	12.0	1.48%	141.7	0.49%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-3	-7.103e+00	0.0059	6.0	0.74%	38.4	0.13%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e-3	-7.001e+00	0.0064	84.0	10.38%	2107.3	7.32%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-3	-6.946e+00	0.0066	29.0	3.58%	542.8	1.89%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-2	-6.653e+00	0.0087	48.0	5.93%	1071.9	3.72%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-2	-6.357e+00	0.0115	10.0	1.24%	114.7	0.40%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-2	-6.243e+00	0.0126	104.0	12.86%	2785.1	9.68%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-2	-6.198e+00	0.0130	46.0	5.69%	1039.8	3.61%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-2	-5.984e+00	0.0158	74.0	9.15%	1880.5	6.53%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-2	-5.935e+00	0.0163	5.0	0.62%	33.5	0.12%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-2	-5.574e+00	0.0230	250.0	30.90%	7666.9	26.64%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-2	-5.473e+00	0.0251	116.0	14.34%	3240.6	11.26%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-2	-5.429e+00	0.0258	35.0	4.33%	769.4	2.67%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-2	-5.418e+00	0.0258	60.0	7.42%	1499.3	5.21%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-2	-5.397e+00	0.0258	32.0	3.96%	687.6	2.39%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-2	-5.306e+00	0.0278	3.0	0.37%	12.8	0.04%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-2	-5.188e+00	0.0308	47.0	5.81%	1128.5	3.92%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-2	-4.952e+00	0.0384	6.0	0.74%	59.9	0.21%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-2	-4.806e+00	0.0438	85.0	10.51%	2322.5	8.07%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-2	-4.798e+00	0.0438	7.0	0.87%	80.2	0.28%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-2	-4.772e+00	0.0440	38.0	4.70%	892.0	3.10%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e-2	-4.749e+00	0.0444	77.0	9.52%	2076.3	7.21%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-2	-4.697e+00	0.0461	34.0	4.20%	780.2	2.71%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-2	-4.689e+00	0.0461	36.0	4.45%	838.6	2.91%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-4.577e+00	0.0506	11.0	1.36%	171.9	0.60%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-1	-4.499e+00	0.0540	61.0	7.54%	1601.3	5.56%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-1	-4.401e+00	0.0587	5.0	0.62%	48.7	0.17%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-1	-4.349e+00	0.0611	80.0	9.89%	2209.2	7.68%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-1	-4.262e+00	0.0658	38.0	4.70%	923.1	3.21%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-1	-4.222e+00	0.0676	25.0	3.09%	550.7	1.91%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-1	-4.213e+00	0.0676	3.0	0.37%	18.9	0.07%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-4.208e+00	0.0676	7.0	0.87%	90.7	0.32%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-1	-4.169e+00	0.0687	49.0	6.06%	1260.8	4.38%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-1	-4.037e+00	0.0774	59.0	7.29%	1579.4	5.49%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-1	-3.997e+00	0.0796	6.0	0.74%	73.9	0.26%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-1	-3.979e+00	0.0801	41.0	5.07%	1032.9	3.59%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-1	-3.825e+00	0.0923	80.0	9.89%	2264.7	7.87%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-1	-3.782e+00	0.0953	63.0	7.79%	1729.0	6.01%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e-1	-3.586e+00	0.1147	1.0	0.12%	0.0	0.00%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-1	-3.503e+00	0.1231	153.0	18.91%	4712.5	16.37%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-1	-3.481e+00	0.1245	37.0	4.57%	948.8	3.30%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-1	-3.455e+00	0.1264	28.0	3.46%	680.6	2.36%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-1	-3.409e+00	0.1309	26.0	3.21%	624.3	2.17%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-1	-3.219e+00	0.1566	50.0	6.18%	1373.8	4.77%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-1	-3.083e+00	0.1774	14.0	1.73%	298.1	1.04%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-1	-3.050e+00	0.1815	78.0	9.64%	2291.5	7.96%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-1	-2.983e+00	0.1921	128.0	15.82%	3958.6	13.75%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-1	-2.962e+00	0.1941	7.0	0.87%	118.8	0.41%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-1	-2.922e+00	0.1999	26.0	3.21%	656.5	2.28%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-1	-2.872e+00	0.2081	10.0	1.24%	198.7	0.69%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-1	-2.795e+00	0.2225	11.0	1.36%	228.2	0.79%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-2.770e+00	0.2259	3.0	0.37%	32.8	0.11%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-1	-2.661e+00	0.2493	130.0	16.07%	4081.6	14.18%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-1	-2.607e+00	0.2606	24.0	2.97%	618.6	2.15%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-1	-2.507e+00	0.2852	6.0	0.74%	106.1	0.37%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-2.485e+00	0.2889	9.0	1.11%	186.3	0.65%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-1	-2.471e+00	0.2902	22.0	2.72%	567.1	1.97%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-2.454e+00	0.2924	33.0	4.08%	910.3	3.16%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e-1	-2.452e+00	0.2924	101.0	12.48%	3141.2	10.91%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-1	-2.430e+00	0.2940	22.0	2.72%	570.7	1.98%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-1	-2.390e+00	0.3033	22.0	2.72%	573.1	1.99%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-1	-2.362e+00	0.3089	85.0	10.51%	2620.7	9.11%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-1	-2.315e+00	0.3210	90.0	11.12%	2796.0	9.71%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-2.296e+00	0.3242	2.0	0.25%	19.7	0.07%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-2.181e+00	0.3607	37.0	4.57%	1065.8	3.70%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-2.137e+00	0.3736	9.0	1.11%	201.5	0.70%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-2.135e+00	0.3736	7.0	0.87%	145.6	0.51%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-2.132e+00	0.3736	11.0	1.36%	260.0	0.90%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.123e+00	0.3736	72.0	8.90%	2224.4	7.73%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-2.049e+00	0.3944	16.0	1.98%	414.9	1.44%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.026e+00	0.3999	15.0	1.85%	385.5	1.34%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-2.018e+00	0.3999	162.0	20.02%	5308.2	18.44%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.995e+00	0.4059	10.0	1.24%	237.3	0.82%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-1.971e+00	0.4123	9.0	1.11%	209.7	0.73%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-1.963e+00	0.4123	17.0	2.10%	451.3	1.57%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.951e+00	0.4139	9.0	1.11%	210.6	0.73%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.951e+00	0.4139	16.0	1.98%	421.3	1.46%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.917e+00	0.4213	25.0	3.09%	707.8	2.46%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.886e+00	0.4312	30.0	3.71%	871.7	3.03%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-1.830e+00	0.4526	140.0	17.31%	4595.8	15.97%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.820e+00	0.4538	53.0	6.55%	1637.2	5.69%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.816e+00	0.4538	15.0	1.85%	400.7	1.39%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.797e+00	0.4573	17.0	2.10%	464.5	1.61%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-1.793e+00	0.4573	23.0	2.84%	655.6	2.28%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.792e+00	0.4573	16.0	1.98%	433.2	1.51%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.766e+00	0.4610	6.0	0.74%	132.4	0.46%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.742e+00	0.4691	26.0	3.21%	757.6	2.63%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.707e+00	0.4822	14.0	1.73%	377.1	1.31%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.678e+00	0.4925	68.0	8.41%	2165.2	7.52%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.675e+00	0.4925	9.0	1.11%	225.9	0.78%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.644e+00	0.5023	25.0	3.09%	735.4	2.56%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.637e+00	0.5023	83.0	10.26%	2683.5	9.32%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.632e+00	0.5023	3.0	0.37%	54.7	0.19%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.632e+00	0.5023	3.0	0.37%	54.9	0.19%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.629e+00	0.5023	14.0	1.73%	383.5	1.33%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.623e+00	0.5023	53.0	6.55%	1668.3	5.80%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-1.602e+00	0.5023	1.0	0.12%	8.1	0.03%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.544e+00	0.5289	9.0	1.11%	233.4	0.81%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.524e+00	0.5360	62.0	7.66%	1990.9	6.92%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-1.493e+00	0.5490	4.0	0.49%	86.3	0.30%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.492e+00	0.5490	49.0	6.06%	1555.1	5.40%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.486e+00	0.5490	16.0	1.98%	459.3	1.60%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.458e+00	0.5573	43.0	5.32%	1358.5	4.72%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.442e+00	0.5628	34.0	4.20%	1058.1	3.68%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.435e+00	0.5630	12.0	1.48%	335.2	1.16%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.410e+00	0.5734	52.0	6.43%	1671.4	5.81%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.407e+00	0.5734	32.0	3.96%	996.4	3.46%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.405e+00	0.5734	5.0	0.62%	119.8	0.42%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-1.392e+00	0.5734	4.0	0.49%	90.0	0.31%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-1.374e+00	0.5795	19.0	2.35%	568.9	1.98%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.365e+00	0.5811	21.0	2.60%	635.6	2.21%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.364e+00	0.5811	9.0	1.11%	245.5	0.85%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.361e+00	0.5811	70.0	8.65%	2296.7	7.98%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.354e+00	0.5811	2.0	0.25%	35.7	0.12%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.353e+00	0.5811	6.0	0.74%	152.9	0.53%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-1.353e+00	0.5811	6.0	0.74%	152.9	0.53%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.350e+00	0.5811	9.0	1.11%	246.2	0.86%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.334e+00	0.5811	10.0	1.24%	279.8	0.97%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.331e+00	0.5811	46.0	5.69%	1481.5	5.15%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.304e+00	0.5848	7.0	0.87%	186.6	0.65%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.279e+00	0.5959	88.0	10.88%	2936.2	10.20%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.272e+00	0.5963	17.0	2.10%	513.6	1.78%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.240e+00	0.6087	2.0	0.25%	38.2	0.13%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.240e+00	0.6087	2.0	0.25%	38.5	0.13%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.213e+00	0.6218	13.0	1.61%	387.3	1.35%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-1.206e+00	0.6226	3.0	0.37%	68.7	0.24%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.200e+00	0.6229	6.0	0.74%	162.0	0.56%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-1.179e+00	0.6327	9.0	1.11%	259.3	0.90%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.171e+00	0.6337	2.0	0.25%	40.2	0.14%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-1.171e+00	0.6337	20.0	2.47%	625.9	2.17%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.165e+00	0.6337	23.0	2.84%	727.6	2.53%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-1.102e+00	0.6682	98.0	12.11%	3332.3	11.58%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.097e+00	0.6682	35.0	4.33%	1147.4	3.99%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.067e+00	0.6841	13.0	1.61%	402.6	1.40%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.060e+00	0.6850	28.0	3.46%	913.4	3.17%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.059e+00	0.6850	17.0	2.10%	538.7	1.87%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.058e+00	0.6850	37.0	4.57%	1223.7	4.25%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-1.046e+00	0.6850	23.0	2.84%	744.8	2.59%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.045e+00	0.6850	38.0	4.70%	1260.3	4.38%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.026e+00	0.6904	5.0	0.62%	140.8	0.49%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.019e+00	0.6912	4.0	0.49%	108.4	0.38%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.017e+00	0.6912	9.0	1.11%	273.1	0.95%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-1.015e+00	0.6912	1.0	0.12%	16.2	0.06%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-9.814e-01	0.7068	23.0	2.84%	754.5	2.62%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-9.745e-01	0.7080	53.0	6.55%	1796.9	6.24%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-9.497e-01	0.7221	28.0	3.46%	932.4	3.24%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-9.484e-01	0.7221	65.0	8.03%	2222.6	7.72%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-9.240e-01	0.7334	8.0	0.99%	248.6	0.86%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-9.234e-01	0.7334	1.0	0.12%	18.8	0.07%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-9.227e-01	0.7334	14.0	1.73%	453.2	1.57%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-9.207e-01	0.7334	29.0	3.58%	972.0	3.38%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-9.146e-01	0.7334	7.0	0.87%	215.4	0.75%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-8.780e-01	0.7490	10.0	1.24%	321.7	1.12%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-8.669e-01	0.7498	3.0	0.37%	84.5	0.29%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-8.669e-01	0.7498	3.0	0.37%	84.1	0.29%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-8.596e-01	0.7517	7.0	0.87%	220.6	0.77%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-8.577e-01	0.7517	6.0	0.74%	186.0	0.65%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-8.511e-01	0.7517	21.0	2.60%	706.7	2.46%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-8.482e-01	0.7517	30.0	3.71%	1021.8	3.55%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-8.454e-01	0.7517	15.0	1.85%	498.6	1.73%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-8.439e-01	0.7517	16.0	1.98%	533.6	1.85%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-8.428e-01	0.7517	10.0	1.24%	325.8	1.13%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-8.229e-01	0.7540	37.0	4.57%	1272.9	4.42%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-8.160e-01	0.7557	33.0	4.08%	1133.6	3.94%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-8.107e-01	0.7561	38.0	4.70%	1311.0	4.56%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-8.107e-01	0.7561	22.0	2.72%	748.1	2.60%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-8.072e-01	0.7561	11.0	1.36%	364.3	1.27%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-7.869e-01	0.7636	26.0	3.21%	893.7	3.11%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-7.811e-01	0.7646	57.0	7.05%	1988.7	6.91%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-7.776e-01	0.7646	54.0	6.67%	1883.2	6.54%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-7.769e-01	0.7646	8.0	0.99%	263.0	0.91%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-7.737e-01	0.7646	1.0	0.12%	22.8	0.08%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-7.648e-01	0.7646	20.0	2.47%	686.2	2.38%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-7.525e-01	0.7691	3.0	0.37%	91.6	0.32%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-7.486e-01	0.7691	5.0	0.62%	161.4	0.56%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-7.486e-01	0.7691	5.0	0.62%	161.5	0.56%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-7.308e-01	0.7756	27.0	3.34%	940.6	3.27%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-7.300e-01	0.7756	29.0	3.58%	1011.4	3.51%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-7.186e-01	0.7781	6.0	0.74%	199.8	0.69%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-7.121e-01	0.7798	4.0	0.49%	129.9	0.45%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-6.817e-01	0.8004	81.0	10.01%	2873.2	9.98%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-6.619e-01	0.8129	15.0	1.85%	528.0	1.83%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-6.513e-01	0.8180	19.0	2.35%	672.4	2.34%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-6.513e-01	0.8180	8.0	0.99%	278.5	0.97%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-6.428e-01	0.8180	4.0	0.49%	135.3	0.47%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-6.319e-01	0.8234	4.0	0.49%	136.7	0.48%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-6.277e-01	0.8234	7.0	0.87%	245.9	0.85%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-6.210e-01	0.8254	78.0	9.64%	2790.9	9.70%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-6.193e-01	0.8254	53.0	6.55%	1897.1	6.59%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-6.009e-01	0.8316	6.0	0.74%	212.7	0.74%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-6.009e-01	0.8316	6.0	0.74%	212.0	0.74%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-5.802e-01	0.8455	4.0	0.49%	141.0	0.49%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-5.790e-01	0.8455	18.0	2.22%	651.8	2.26%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-5.747e-01	0.8455	9.0	1.11%	325.1	1.13%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-5.529e-01	0.8582	16.0	1.98%	584.8	2.03%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-5.487e-01	0.8583	2.0	0.25%	69.2	0.24%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-5.281e-01	0.8726	78.0	9.64%	2830.4	9.83%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-4.973e-01	0.8963	4.0	0.49%	150.9	0.52%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-4.730e-01	0.9146	15.0	1.85%	565.9	1.97%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-4.684e-01	0.9152	43.0	5.32%	1591.8	5.53%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-4.656e-01	0.9152	52.0	6.43%	1919.8	6.67%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-4.628e-01	0.9152	30.0	3.71%	1119.1	3.89%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-4.570e-01	0.9152	93.0	11.50%	3406.2	11.83%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-4.557e-01	0.9152	25.0	3.09%	938.9	3.26%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-4.383e-01	0.9245	27.0	3.34%	1018.0	3.54%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-4.357e-01	0.9245	1.0	0.12%	37.8	0.13%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-4.353e-01	0.9245	6.0	0.74%	235.6	0.82%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-4.307e-01	0.9245	3.0	0.37%	119.3	0.41%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-4.234e-01	0.9245	43.0	5.32%	1609.7	5.59%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-4.202e-01	0.9245	62.0	7.66%	2303.6	8.00%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-3.951e-01	0.9430	18.0	2.22%	697.3	2.42%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-3.904e-01	0.9439	8.0	0.99%	320.5	1.11%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-3.829e-01	0.9474	6.0	0.74%	244.7	0.85%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-3.716e-01	0.9545	2.0	0.25%	85.3	0.30%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-3.641e-01	0.9580	55.0	6.80%	2076.5	7.21%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-3.457e-01	0.9721	2.0	0.25%	88.6	0.31%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-3.329e-01	0.9809	26.0	3.21%	1019.0	3.54%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-3.238e-01	0.9862	159.0	19.65%	5883.9	20.44%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-3.148e-01	0.9914	18.0	2.22%	723.4	2.51%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-3.142e-01	0.9914	2.0	0.25%	92.8	0.32%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-3.140e-01	0.9914	68.0	8.41%	2583.0	8.97%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-3.134e-01	0.9914	3.0	0.37%	135.3	0.47%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-3.120e-01	0.9914	18.0	2.22%	724.4	2.52%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-3.111e-01	0.9914	26.0	3.21%	1027.9	3.57%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-3.079e-01	0.9914	27.0	3.34%	1066.1	3.70%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-3.054e-01	0.9914	11.0	1.36%	457.8	1.59%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-2.935e-01	0.9914	9.0	1.11%	382.3	1.33%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-2.681e-01	1.0000	13.0	1.61%	547.3	1.90%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-2.670e-01	1.0000	25.0	3.09%	1009.5	3.51%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.564e-01	1.0000	17.0	2.10%	707.9	2.46%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-2.550e-01	1.0000	1.0	0.12%	53.0	0.18%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-2.476e-01	1.0000	2.0	0.25%	103.0	0.36%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-2.408e-01	1.0000	5.0	0.62%	234.9	0.82%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-2.385e-01	1.0000	78.0	9.64%	3006.9	10.45%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-2.318e-01	1.0000	1.0	0.12%	56.1	0.19%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-2.295e-01	1.0000	31.0	3.83%	1257.4	4.37%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-2.290e-01	1.0000	68.0	8.41%	2645.0	9.19%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-2.261e-01	1.0000	34.0	4.20%	1373.7	4.77%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-2.241e-01	1.0000	8.0	0.99%	363.8	1.26%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-2.160e-01	1.0000	20.0	2.47%	842.3	2.93%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-2.136e-01	1.0000	10.0	1.24%	448.8	1.56%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-2.110e-01	1.0000	10.0	1.24%	449.0	1.56%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-2.040e-01	1.0000	8.0	0.99%	370.6	1.29%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-2.004e-01	1.0000	18.0	2.22%	773.0	2.69%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.909e-01	1.0000	2.0	0.25%	113.5	0.39%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.882e-01	1.0000	8.0	0.99%	376.9	1.31%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.774e-01	1.0000	29.0	3.58%	1215.0	4.22%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.770e-01	1.0000	161.0	19.90%	6118.3	21.26%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-1.717e-01	1.0000	6.0	0.74%	299.0	1.04%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.681e-01	1.0000	76.0	9.39%	3000.8	10.43%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.597e-01	1.0000	8.0	0.99%	388.9	1.35%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.565e-01	1.0000	6.0	0.74%	304.8	1.06%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-1.553e-01	1.0000	47.0	5.81%	1922.7	6.68%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.542e-01	1.0000	7.0	0.87%	348.7	1.21%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-1.481e-01	1.0000	18.0	2.22%	804.0	2.79%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.440e-01	1.0000	22.0	2.72%	965.7	3.36%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.425e-01	1.0000	6.0	0.74%	310.9	1.08%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.413e-01	1.0000	1.0	0.12%	72.9	0.25%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-1.392e-01	1.0000	62.0	7.66%	2508.4	8.72%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.285e-01	1.0000	5.0	0.62%	272.9	0.95%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.285e-01	1.0000	5.0	0.62%	272.5	0.95%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.190e-01	1.0000	19.0	2.35%	865.4	3.01%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.149e-01	1.0000	13.0	1.61%	623.9	2.17%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.112e-01	1.0000	1.0	0.12%	80.0	0.28%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.112e-01	1.0000	1.0	0.12%	80.0	0.28%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-1.093e-01	1.0000	8.0	0.99%	415.4	1.44%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.021e-01	1.0000	12.0	1.48%	591.0	2.05%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-9.582e-02	1.0000	1.0	0.12%	85.2	0.30%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-9.530e-02	1.0000	28.0	3.46%	1249.9	4.34%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-9.220e-02	1.0000	19.0	2.35%	890.3	3.09%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-9.217e-02	1.0000	102.0	12.61%	4085.3	14.19%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-8.859e-02	1.0000	133.0	16.44%	5247.9	18.23%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-8.541e-02	1.0000	25.0	3.09%	1141.7	3.97%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-8.223e-02	1.0000	5.0	0.62%	298.6	1.04%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-8.081e-02	1.0000	5.0	0.62%	299.5	1.04%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-7.871e-02	1.0000	53.0	6.55%	2252.1	7.82%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-7.158e-02	1.0000	15.0	1.85%	747.9	2.60%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-6.856e-02	1.0000	19.0	2.35%	918.7	3.19%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-5.763e-02	1.0000	28.0	3.46%	1304.7	4.53%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-5.430e-02	1.0000	2.0	0.25%	166.9	0.58%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-4.956e-02	1.0000	3.0	0.37%	225.1	0.78%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-4.179e-02	1.0000	3.0	0.37%	233.1	0.81%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-4.116e-02	1.0000	1.0	0.12%	115.0	0.40%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-3.999e-02	1.0000	1.0	0.12%	115.7	0.40%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-3.639e-02	1.0000	18.0	2.22%	932.1	3.24%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-3.464e-02	1.0000	1.0	0.12%	120.5	0.42%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-3.226e-02	1.0000	15.0	1.85%	812.1	2.82%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-2.783e-02	1.0000	68.0	8.41%	2980.7	10.36%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-2.563e-02	1.0000	56.0	6.92%	2519.3	8.75%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-2.330e-02	1.0000	3.0	0.37%	260.4	0.90%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-2.150e-02	1.0000	66.0	8.16%	2937.0	10.20%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.512e-02	1.0000	1.0	0.12%	149.6	0.52%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.314e-02	1.0000	137.0	16.93%	5741.8	19.95%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-7.815e-03	1.0000	3.0	0.37%	309.7	1.08%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-6.634e-03	1.0000	1.0	0.12%	178.4	0.62%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-3.752e-03	1.0000	3.0	0.37%	341.2	1.19%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-3.108e-03	1.0000	5.0	0.62%	469.7	1.63%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-2.370e-03	1.0000	2.0	0.25%	293.4	1.02%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.000e-06	1.0000	34.0	4.20%	2449.6	8.51%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-0.000e+00	1.0000	38.0	4.70%	2900.3	10.08%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	63.9	0.22%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	25.5	0.09%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	109.8	0.38%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	21.9	0.08%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	9.9	0.03%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	2.0	0.01%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	54.6	0.19%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	18.7	0.06%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	37.1	0.13%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	16.6	0.06%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	30.6	0.11%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	95.4	0.33%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	4.0	0.01%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	29.2	0.10%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	6.3	0.02%