Information for 7-GGCTCAGRGTGGR (Motif 7)

A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A
Reverse Opposite:
A G C T G T A C G T A C T G C A A T G C G A T C A G T C C G A T A C T G T G C A A C T G A G T C G T A C
p-value:1e-11
log p-value:-2.648e+01
Information Content per bp:1.715
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif28.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.6 +/- 23.8bp
Average Position of motif in Background54.6 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCTCAGRGTGGR
-DCTCAGCAGG--
 A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCAGRGTGGR
NGGATTAN------
 A C G T A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCTCAGRGTGGR---
-DCHCAGCAGGRGGCC
 A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGCTCAGRGTGGR-----
--TGCGGAGTGGGACTGG
 A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCTCAGRGTGGR
GGGGCCCAAGGGGG-
 A C G T A C G T A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCTCAGRGTGGR---
-NCGCAGCGGGGGGTC
 A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A A C G T A C G T A C G T
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCTCAGRGTGGR
-GCTCCG------
 A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCTCAGRGTGGR-----
-GTATTGGGTGGGTAATT
 A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGCTCAGRGTGGR-
--CACAGCAGGGGG
 A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGCTCAGRGTGGR--
-----GGGGNGGGGC
 A C T G T A C G G T A C A C G T A G T C C G T A A C T G C T A G T A C G A C G T A C T G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C