Information for 3-CCACWAGAKGGCG (Motif 3)

T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G
Reverse Opposite:
A G T C A C T G A G T C G T A C T G A C A G C T T A G C C G A T C G A T T A C G A C G T A T C G A C T G
p-value:1e-20
log p-value:-4.820e+01
Information Content per bp:1.680
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif71.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets43.6 +/- 22.0bp
Average Position of motif in Background45.1 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CCACWAGAKGGCG------
GCCASCAGGGGGCGCYVNNG
 A C G T T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CCACWAGAKGGCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---CCACWAGAKGGCG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCACWAGAKGGCG--
---CAAGATGGCGGC
 T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCACWAGAKGGCG-----
-NNNAAGGGGGCGGGNNN
 T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CCACWAGAKGGCG--
---CAAGATGGCGGC
 T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCACWAGAKGGCG
--AACAGATGGC-
 T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCACWAGAKGGCG-
-----TNNGGGCAG
 T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCACWAGAKGGCG-----
----AAGGGGGCGTGGCC
 T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

KLF13/MA0657.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCACWAGAKGGCG------
-CAAAAAGGGGCGTGGCAT
 T A G C A T G C T G C A A T G C G C T A C G T A A T C G T C G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T