Information for 9-TTWSACCARA (Motif 18)

A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A
Reverse Opposite:
A C G T G A T C A C G T A C T G A C T G A C G T A T G C C G T A C G T A C G T A
p-value:1e-8
log p-value:-1.843e+01
Information Content per bp:1.805
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif77.2
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets50.0 +/- 25.3bp
Average Position of motif in Background49.1 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTWSACCARA---
-NWAACCACADNN
 A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTWSACCARA--
--AAACCACAGC
 A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTWSACCARA---
--AAACCACAGAN
 A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTWSACCARA--
--ATGCCAGACN
 A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A A C G T A C G T
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTWSACCARA-
-NAAACCACAG
 A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTWSACCARA-------
CAAATCCAGACATCACA
 A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTWSACCARA--
--TGCCCAGNHW
 A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTWSACCARA--
--AAACCACANN
 A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTWSACCARA-----
-----CCAGACRSVB
 A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTWSACCARA
ATCACCCCAT-
 A C G T A C G T C G A T C G A T A T C G G T C A A G T C A G T C C G T A C T A G C G T A
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T