Information for 6-GCSCAGGCGCACCACA (Motif 15)

A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A
Reverse Opposite:
A C G T A C T G C G A T C A T G C T A G A G C T A C T G A T G C A T C G A G T C T A G C G A C T A C T G A T G C A T C G T A G C
p-value:1e-9
log p-value:-2.099e+01
Information Content per bp:1.704
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.7 +/- 26.1bp
Average Position of motif in Background56.0 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.63
Offset:7
Orientation:forward strand
Alignment:GCSCAGGCGCACCACA---
-------NWAACCACADNN
 A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCSCAGGCGCACCACA
TGCGCAGGCGC------
 A C G T A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCSCAGGCGCACCACA
GCGCATGCGCAC----
 A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCSCAGGCGCACCACA
GCGCATGCGCAG----
 A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCSCAGGCGCACCACA
AGCAACAGCCGCACC---
 A C G T A C G T A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GCSCAGGCGCACCACA--
--------AAACCACAGC
 A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GCSCAGGCGCACCACA-
-------NAAACCACAG
 A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GCSCAGGCGCACCACA---
--------AAACCACAGAN
 A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.55
Offset:8
Orientation:forward strand
Alignment:GCSCAGGCGCACCACA--
--------AAACCACANN
 A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.55
Offset:9
Orientation:forward strand
Alignment:GCSCAGGCGCACCACA
---------ATCCAC-
 A T C G A T G C T A C G G T A C C G T A A T C G C T A G T A G C A T C G T A G C C T G A A G T C G T A C C G T A G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T