Information for 10-GCACAGGCAAGCC (Motif 12)

A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C
Reverse Opposite:
C T A G A T C G A G T C C G A T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.925
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.6 +/- 27.2bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCACAGGCAAGCC-
---AAGGCAAGTGT
 A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCACAGGCAAGCC--
TCCCAGMCRAGCCCC
 A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCACAGGCAAGCC
ATGCCCGGGCATGT-
 A C G T A C G T A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCACAGGCAAGCC
-CACAGN------
 A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCACAGGCAAGCC
CCAGGAACAG-------
 A C G T A C G T A C G T A C G T A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACAGGCAAGCC
TGCCCAGNHW----
 A C G T A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCACAGGCAAGCC
AGCAACAGCCGCACC
 A C G T A C G T A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCACAGGCAAGCC
-NACAGGAAAT--
 A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GCACAGGCAAGCC
AAGGKGRCGCAGGCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCACAGGCAAGCC--
AACATGCCCAGACATGCCCN
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A G T C C G T A A C T G A C T G A G T C G T C A C G T A A C T G A T G C A G T C A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T