Information for 23-GGGACAGCTGTCC (Motif 43)

A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C C G T A A T C G A G T C A C G T A T C G A C G T A G T C G T A C A G T C
p-value:1e-4
log p-value:-9.579e+00
Information Content per bp:1.920
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.5 +/- 26.9bp
Average Position of motif in Background49.4 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX1/MA0782.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GGGACAGCTGTCC
-TGACAGGTGTCA
 A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C
A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

TGIF1/MA0796.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GGGACAGCTGTCC
-TGACAGCTGTCA
 A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C
A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A

TGIF2/MA0797.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GGGACAGCTGTCC
-TGACAGCTGTCA
 A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C
A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

PKNOX2/MA0783.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGGACAGCTGTCC
-TGACAGGTGTCA
 A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C
A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGGACAGCTGTCC-
GAAGAACAGGTGTCCG
 A C G T A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGACAGCTGTCC
NGNGACAGCTGCN-
 A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGACAGCTGTCC
-BAACAGCTGT--
 A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C
A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGGACAGCTGTCC
---ACAGCTGTTN
 A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C
A C G T A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGGACAGCTGTCC
--AACAGCTG---
 A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGACAGCTGTCC
--AACAGCTGTT-
 A C T G A C T G A C T G C G T A A T G C C G T A A C T G A T G C A C G T A C T G A C G T A G T C A G T C
A C G T A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T