Information for 24-CTACACCTCACTGGCC (Motif 42)

A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C
Reverse Opposite:
A C T G A C T G A T G C A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G
p-value:1e-6
log p-value:-1.436e+01
Information Content per bp:1.940
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.8 +/- 24.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTACACCTCACTGGCC
NNGGCGACACCTCNNN----
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTACACCTCACTGGCC
ACTACAATTCCC-----
 A C G T A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTACACCTCACTGGCC
TCACACCT--------
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CTACACCTCACTGGCC
------CCGATTGGCT
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTACACCTCACTGGCC--
RACTACAACTCCCAGVAKGC
 A C G T A C G T A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTACACCTCACTGGCC---
TTTMCGCTTSABTGAACACN
 A C G T A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CTACACCTCACTGGCC
-TACACCTGTC-----
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTACACCTCACTGGCC
TCACACCT--------
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTACACCTCACTGGCC
TGACACCT--------
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CTACACCTCACTGGCC
-NWAACCACADNN---
 A G T C A C G T C G T A A G T C C G T A A G T C A G T C C G A T A G T C C G T A A G T C G C A T A C T G A T C G A G T C A G T C
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T