Information for 19-TTCAGCACCTTGG (Motif 39)

A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C T G T A G C A C G T A C T G C T G A C G T A
p-value:1e-6
log p-value:-1.443e+01
Information Content per bp:1.890
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 26.8bp
Average Position of motif in Background39.2 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTCAGCACCTTGG--------
TTCAGCACCATGGACAGCGCC
 A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTCAGCACCTTGG--------
-TCAGCACCATGGACAGCTCC
 A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTCAGCACCTTGG-
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGCACCTTGG---
NNNNATGACCTTGANTN
 A C G T A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGCACCTTGG---
NNTNCGCACCTGTNGAN
 A C G T A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTCAGCACCTTGG
--TGACACCT---
 A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTCAGCACCTTGG-
----TGACCTTGAV
 A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTCAGCACCTTGG
---ATGACCTTGA
 A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTCAGCACCTTGG
---AACACCTGCT
 A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G
A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTCAGCACCTTGG
---CGCACCTGCT
 A C G T A G C T A G T C G T C A A C T G A G T C C G T A A G T C A G T C A C G T A C G T C T A G A C T G
A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T