Information for 7-TGCTWAGGAG (Motif 38)

A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T A C A G C T C G A T C G T A C T A G G T A C C G T A
p-value:1e-6
log p-value:-1.550e+01
Information Content per bp:1.812
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif53.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets53.7 +/- 27.5bp
Average Position of motif in Background45.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGCTWAGGAG
WATGCAAATGAG
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGCTWAGGAG
TATGCWAATBAV
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU1F1/MA0784.1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGCTWAGGAG
AATATGCAAATTAG
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCTWAGGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0098.1_Lhx8/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGCTWAGGAG----
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

PH0032.1_Evx2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCTWAGGAG----
CACCGCTAATTAGCGGT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0097.1_Lhx6_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGCTWAGGAG----
NNNCGCTAATTAGNNGA
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G A C G T A C G T A C G T A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCTWAGGAG--
--NTAATGAGCT
 A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G A C G T A C G T
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TGCTWAGGAG--
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCTWAGGAG
TGTTTAC---
 A C G T A C T G A G T C A C G T C G T A C T G A A C T G T C A G C G T A A C T G
A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T