Information for 16-CTGGYGCCAGYCA (Motif 37)

A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A
Reverse Opposite:
A C G T A C T G C T G A A G T C G C A T A C T G A C T G T G A C C T A G G A T C A T G C C T G A A C T G
p-value:1e-7
log p-value:-1.638e+01
Information Content per bp:1.760
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif81.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets42.1 +/- 21.0bp
Average Position of motif in Background48.9 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CTGGYGCCAGYCA-
------CCAGACAG
 A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGGYGCCAGYCA-----
-CAAATCCAGACATCACA
 A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTGGYGCCAGYCA-
------BCAGACWA
 A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PKNOX2/MA0783.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGGYGCCAGYCA
-TGACACCTGTCA
 A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGGYGCCAGYCA
---ATGCCAGACN
 A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CTGGYGCCAGYCA-
------GCTGTCAA
 A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGGYGCCAGYCA
-AGGTGHCAGACA
 A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGGYGCCAGYCA
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGGYGCCAGYCA----
-AAGCACCTGTCAATAT
 A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PKNOX1/MA0782.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGGYGCCAGYCA
-TGACACCTGTCA
 A G T C A G C T T A C G C T A G A G T C A C T G A G T C A G T C C G T A A C T G A G C T A G T C G T C A
A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A