Information for 2-CACAYRWMAKGCMGTC (Motif 3)

A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C G T A C T G A T G C G T C A A C G T A C T G C G T A A G C T T C A G A C G T A C T G A C G T A C T G
p-value:1e-13
log p-value:-3.172e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 27.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CACAYRWMAKGCMGTC
CGAAGCACACAAAATA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CACAYRWMAKGCMGTC-----
----NNNANTGCAGTGCNNTT
 A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CACAYRWMAKGCMGTC
NWAACCACADNN---------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:4
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CACAYRWMAKGCMGTC---
-------GATGACGTCATC
 A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.47
Offset:0
Orientation:forward strand
Alignment:CACAYRWMAKGCMGTC
TACCCACAATGCATTG
 A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-CACAYRWMAKGCMGTC
CCACACAGCAGGAGA--
 A C G T A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:CACAYRWMAKGCMGTC
--CACAGCGGGGGGTC
 A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Creb5/MA0840.1/Jaspar

Match Rank:8
Score:0.46
Offset:7
Orientation:forward strand
Alignment:CACAYRWMAKGCMGTC---
-------AATGACGTCACC
 A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A G A C T C A T G C G T A A G T C C T A G G C A T G T A C C G T A A G T C G A T C

ATF7/MA0834.1/Jaspar

Match Rank:9
Score:0.46
Offset:6
Orientation:forward strand
Alignment:CACAYRWMAKGCMGTC----
------CGATGACGTCATCG
 A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G T C G A C A G T C A T G C T G A A G T C T C A G C A G T T G A C C T G A A G C T G T A C T C A G

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:10
Score:0.46
Offset:-8
Orientation:forward strand
Alignment:--------CACAYRWMAKGCMGTC
TGTCATTACACGTGGAAGGCGGT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C T G A C G A T G T A C C G T A A C G T A T C G A G T C G T C A A C T G A C G T A G T C
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T A C G T