Information for 16-TGTCATGAAGGAGAGT (Motif 27)

A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T
Reverse Opposite:
C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T A T G C C T G A A C G T A C T G T C G A A G T C C G T A
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.4 +/- 12.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGTCATGAAGGAGAGT
NNTNTCATGAATGT----
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTCATGAAGGAGAGT
NTGTCAN----------
 A C G T A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGTCATGAAGGAGAGT---
----TTGACCGAGAATTCC
 A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTCATGAAGGAGAGT
CCTGTCAA----------
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGTCATGAAGGAGAGT
-GTCATN---------
 A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TGTCATGAAGGAGAGT---
----NNNACCGAGAGTNNN
 A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGTCATGAAGGAGAGT
YTGWCADY---------
 A C G T A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TGTCATGAAGGAGAGT
----AGAAACGAAAGT
 A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T
A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGTCATGAAGGAGAGT
NTTNTATGAATGTGNNC
 A C G T A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TGTCATGAAGGAGAGT
TGTCANYT--------
 A C G T A C T G A G C T A G T C C G T A A G C T T A C G C G T A C G T A A C T G A C T G C G T A A C T G C G T A C T A G C G A T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T