Information for 13-GYTMARGKYWCACAAW (Motif 24)

A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T
Reverse Opposite:
C G T A C G A T C G A T A C T G A C G T T A C G C G A T C T A G G T A C A G T C A G C T A C G T A C G T C G T A C T G A A G T C
p-value:1e-8
log p-value:-2.027e+01
Information Content per bp:1.788
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.4 +/- 15.3bp
Average Position of motif in Background73.0 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GYTMARGKYWCACAAW-----
------CTCACACAATGGCGC
 A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GYTMARGKYWCACAAW---
---CGAAGCACACAAAATA
 A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GYTMARGKYWCACAAW
-------GTAAACAAT
 A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:GYTMARGKYWCACAAW---
----------GACAATGNN
 A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

FOXF2/MA0030.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GYTMARGKYWCACAAW
--CAAACGTAAACAAT
 A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T
A C G T A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:GYTMARGKYWCACAAW-
-----------ACAAAG
 A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GYTMARGKYWCACAAW--
--------RNAACAATGG
 A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:GYTMARGKYWCACAAW
----------AACAAT
 A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GYTMARGKYWCACAAW--
--------VRRACAAWGG
 A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GYTMARGKYWCACAAW---
--AAAAAGTAAACAAACAC
 A C T G A G C T A C G T G T C A G T C A C T G A A C T G C A T G A G T C G C T A A T G C T G C A A G T C C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C