Information for 12-CTGGGGAAGGCAAGGC (Motif 23)

A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A G C T C T A G G A T C A G T C A C G T A C G T A T G C A T G C A G T C A G T C C G T A A C T G
p-value:1e-8
log p-value:-2.027e+01
Information Content per bp:1.920
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 13.3bp
Average Position of motif in Background40.2 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGGGGAAGGCAAGGC
-TGGGGAAGGGCM---
 A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTGGGGAAGGCAAGGC-
------AAGGCAAGTGT
 A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGGGGAAGGCAAGGC
-TGGGGA---------
 A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGGGGAAGGCAAGGC
WDNCTGGGCA---------
 A C G T A C G T A C G T A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGGGGAAGGCAAGGC-
--AGGGAAGTCATTTCT
 A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C A C G T
A C G T A C G T C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGGAAGGCAAGGC
TTCTNMGGAA--------
 A C G T A C G T A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGGAAGGCAAGGC
CSTGGGAAAD-------
 A C G T A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGGGGAAGGCAAGGC
-AGAGGAA--------
 A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CTGGGGAAGGCAAGGC---
----CAAAGGCGTGGCCAG
 A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.48
Offset:10
Orientation:forward strand
Alignment:CTGGGGAAGGCAAGGC----
----------CAAGGHCANV
 A G T C A C G T A C T G C T A G A T C G A T C G C G T A C G T A C T A G C T A G A G T C C T G A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G