Information for 9-KGATGCCATYGGA (Motif 21)

A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A
Reverse Opposite:
A G C T A G T C A G T C C T A G C G T A A C G T A C T G A C T G A G T C C G T A A C G T A G T C G T C A
p-value:1e-8
log p-value:-2.027e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 26.9bp
Average Position of motif in Background57.2 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN/MA0488.1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----KGATGCCATYGGA
AAGATGATGTCAT----
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:KGATGCCATYGGA-
GGTTGCCATGGCAA
 A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:KGATGCCATYGGA-
NGTTGCCATGGCAA
 A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-KGATGCCATYGGA
MTGATGCAAT----
 A C G T A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:KGATGCCATYGGA
--ATGCCAACC--
 A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-KGATGCCATYGGA
ATGATGCAAT----
 A C G T A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-KGATGCCATYGGA--
ACTATGCCAACCTACC
 A C G T A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----KGATGCCATYGGA
AAAGATGATGTCATC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---KGATGCCATYGGA
GGATGATGCAATA---
 A C G T A C G T A C G T A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A A C G T A C G T A C G T

RFX5/MA0510.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:KGATGCCATYGGA---
NGTTGCCATGGCAACG
 A C G T A C T G G T C A A C G T A C T G A G T C A G T C C G T A A C G T A G T C C T A G A C T G C T G A A C G T A C G T A C G T
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G