Information for 1-CCATAAGCCGTGGTCT (Motif 2)

A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A A T G C A G T C C G T A G T A C A T C G C T A G A G T C G A C T A G C T C T G A A C G T A C T G A C T G
p-value:1e-13
log p-value:-3.172e+01
Information Content per bp:1.804
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.5 +/- 18.2bp
Average Position of motif in Background34.5 +/- 1.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCATAAGCCGTGGTCT
CCATATGT--------
 A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCATAAGCCGTGGTCT
GCCATATGGT-------
 A C G T A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:3
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCATAAGCCGTGGTCT
ACCATATGGT-------
 A C G T A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCATAAGCCGTGGTCT
ACCATATGTT-------
 A C G T A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCATAAGCCGTGGTCT
BCMATTAG---------
 A C G T A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CCATAAGCCGTGGTCT----
---NNANTGGTGGTCTTNNN
 A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CCATAAGCCGTGGTCT
ACCATATGTT-------
 A C G T A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CCATAAGCCGTGGTCT
ACCATATGTT-------
 A C G T A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CCATAAGCCGTGGTCT
AACATATGTC-------
 A C G T A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CCATAAGCCGTGGTCT
ATTTCCCAGVAKSCY------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A G C T C T G A C G T A A C T G A G T C A T G C A C T G C G A T C T A G A T C G C G A T A G T C C G A T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T