Information for 11-AAAGAAAGCA (Motif 13)

C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A
Reverse Opposite:
A C G T A T C G A G T C A C G T C A G T A C G T A G T C A C G T C G A T A G C T
p-value:1e-17
log p-value:-4.079e+01
Information Content per bp:1.842
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets46.5 +/- 27.0bp
Average Position of motif in Background42.4 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAAGAAAGCA---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAAGAAAGCA
AAAACAAAGG-
 A C G T C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAAGAAAGCA--
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAAGAAAGCA---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AAAGAAAGCA
AGAAACGAAAGT-
 A C G T A C G T A C G T C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------AAAGAAAGCA
CAAAAGTAAACAAAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AAAGAAAGCA
TACTGGAAAAAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAAGAAAGCA
GAAAGTGAAAGT-
 A C G T A C G T A C G T C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAGAAAGCA
GGAACAAAGR-
 A C G T C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAGAAAGCA
ACTGAAACCA
 C T G A C G T A C G T A C T A G C G T A G C T A T C G A A C T G T A G C G T C A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A