Information for 12-GAGAGACACCAGC (Motif 5)

A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C C G A T A C T G A C T G A C G T A C T G A C G T T G A C A C G T G T A C A C G T A G T C
p-value:1e-13
log p-value:-3.124e+01
Information Content per bp:1.937
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 24.9bp
Average Position of motif in Background78.1 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAGAGACACCAGC-
TGACANARRCCAGRC
 A C G T A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAGAGACACCAGC-
----TACACCTGTC
 A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGAGACACCAGC--
---SNGCACCTGCHS
 A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAGAGACACCAGC-
----NNCACCTGNN
 A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAGAGACACCAGC-
----AACACCTGCT
 A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAGAGACACCAGC-
-----NCACCTGTN
 A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGAGACACCAGC-
AGAGRRACAGCWGAC
 A C G T A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GAGAGACACCAGC-
----CGCACCTGCT
 A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGAGACACCAGC--
NNGGCGACACCTCNNN
 A C G T A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGAGACACCAGC
-GGACACACCCCC
 A C T G C G T A A C T G C G T A A C T G C G T A A G T C C G T A A G T C A G T C C G T A A C T G A G T C
A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C