Information for 8-CCGCCACCCACATSCG (Motif 4)

A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
Reverse Opposite:
T G A C A T C G A T C G C T G A C A G T C T A G C A G T A C T G T A C G A T C G A G C T C T A G A T C G G A T C C T A G A C T G
p-value:1e-13
log p-value:-3.155e+01
Information Content per bp:1.690
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets68.2 +/- 23.3bp
Average Position of motif in Background34.2 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGCCACCCACATSCG
CCCCCGCCCCCGCC--
 A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCGCCACCCACATSCG
----TACCCGCATN--
 A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
A C G T A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCGCCACCCACATSCG
---GTACCCGCATN--
 A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCGCCACCCACATSCG
--GCCACACCCA----
 A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCGCCACCCACATSCG
-CCCCTCCCCCAC---
 A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T A C G T

PB0100.1_Zfp740_1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCGCCACCCACATSCG
CCCCCCCCCCCACTTG
 A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCGCCACCCACATSCG
--YCCGCCCACGCN--
 A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CCGCCACCCACATSCG
TACGCCCCGCCACTCTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGCCACCCACATSCG
TCCCCCCCCCCCCCC--
 A C G T A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCGCCACCCACATSCG
--GCCACGCCCCC---
 A G T C G A T C C T A G T A G C A G T C C T G A T A G C A G T C T A G C G T C A A G T C G T C A G A C T T A G C T A G C A C T G
A C G T A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T A C G T A C G T