Information for 1-AAACCRCARN (Motif 1)

G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C
Reverse Opposite:
A T C G G A C T C G A T A C T G G A C T A C T G T A C G A G C T A C G T C G A T
p-value:1e-208
log p-value:-4.811e+02
Information Content per bp:1.612
Number of Target Sequences with motif406.0
Percentage of Target Sequences with motif48.80%
Number of Background Sequences with motif3776.9
Percentage of Background Sequences with motif8.15%
Average Position of motif in Targets51.8 +/- 24.7bp
Average Position of motif in Background50.0 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AAACCRCARN
AAACCGCAA-
 G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AAACCRCARN
AAACCGCAAA
 G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AAACCRCARN
AAACCACANN
 G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-AAACCRCARN
NAAACCACAG-
 A C G T G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:AAACCRCARN-
AAACCACAGAN
 G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-AAACCRCARN-
NWAACCACADNN
 A C G T G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:AAACCRCARN
AAACCACAGC
 G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AAACCRCARN
-ATCCAC---
 G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAACCRCARN
TACCCGCATN
 G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAACCRCARN---
TCGTACCCGCATCATT
 A C G T A C G T A C G T G C T A T G C A T C G A A T G C A G T C C T G A A G T C G C T A C T G A T A G C A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T