Information for 2-CGCCTCCATGTGG (Motif 2)

A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G
Reverse Opposite:
A G T C A T G C C G T A A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C T G A G T C A C T G
p-value:1e-12
log p-value:-2.860e+01
Information Content per bp:1.867
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.9 +/- 23.1bp
Average Position of motif in Background72.7 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CGCCTCCATGTGG--
-----CCATGTGCTT
 A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CGCCTCCATGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGCCTCCATGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGCCTCCATGTGG----
-----NNHTGTGGTTWN
 A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTCCATGTGG-----
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGCCTCCATGTGG
-ACTTCCTBGT--
 A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G
A C G T T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGCCTCCATGTGG
-GCCGCCATCTTG
 A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

ELF5/MA0136.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCCTCCATGTGG
NACTTCCGGGT--
 A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G
G A C T C T G A A G T C C G A T C A G T G T A C G T A C A C T G A T C G A C T G G C A T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CGCCTCCATGTGG--
-----CCACGTGGNN
 A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCCTCCATGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C T A C G A G T C A G T C A C G T A G T C A G T C T C G A A C G T A C T G A C G T A T C G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A