Information for 4-ATGTGGTTTC (Motif 3)

G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C
Reverse Opposite:
T A C G C G T A T G C A T C G A A G T C A G T C G C T A A G T C C G T A C A G T
p-value:1e-33
log p-value:-7.643e+01
Information Content per bp:1.663
Number of Target Sequences with motif116.0
Percentage of Target Sequences with motif14.34%
Number of Background Sequences with motif1721.4
Percentage of Background Sequences with motif3.81%
Average Position of motif in Targets50.8 +/- 27.4bp
Average Position of motif in Background49.1 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGTTTC
NNTGTGGTTT-
 A C G T G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:ATGTGGTTTC
CTGTGGTTTN
 G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--ATGTGGTTTC
NNHTGTGGTTWN
 A C G T A C G T G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--ATGTGGTTTC
GTCTGTGGTTT-
 A C G T A C G T G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGTTTC
GCTGTGGTTT-
 A C G T G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGTTTC
TTTGCGGTTT-
 A C G T G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:ATGTGGTTTC
TTGCGGTTT-
 G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:ATGTGGTTTC
--GTGGAT--
 G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ATGTGGTTTC--
-TGTGGATTNNN
 G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGTTTC-
NNTGTGGATTSS
 A C G T G T C A C G A T T C A G C G A T A C T G C T A G A G C T A C G T G C A T A T G C A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G