Information for 9-CGCGGATCAGAGTCAG (Motif 14)

A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G A G T C A C T G
p-value:1e-7
log p-value:-1.653e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.5 +/- 22.2bp
Average Position of motif in Background42.2 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGCGGATCAGAGTCAG
--NGGATTAN------
 A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGCGGATCAGAGTCAG
---AGGTCAAGGTCA-
 A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:CGCGGATCAGAGTCAG--
--------TGAGTCAGCA
 A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CGCGGATCAGAGTCAG--
------GCTGASTCAGCA
 A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

FOS::JUN/MA0099.2/Jaspar

Match Rank:5
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CGCGGATCAGAGTCAG
--------TGAGTCA-
 A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGCGGATCAGAGTCAG
-GNGGATTAGN-----
 A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CGCGGATCAGAGTCAG--
--GGGGTCAAAGTCCAAT
 A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CGCGGATCAGAGTCAG
----GAAATGACTCA-
 A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T

PH0035.1_Gsc/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGATCAGAGTCAG
NNAAGGGATTAACGANT-
 A C G T A C G T A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T A C G T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CGCGGATCAGAGTCAG
-----ATCAAGGTCA-
 A G T C A C T G A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T