Information for 13-ATAAAATATC (Motif 24)

C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T
p-value:1e-5
log p-value:-1.236e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.7 +/- 12.5bp
Average Position of motif in Background51.7 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------ATAAAATATC-
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------ATAAAATATC
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------ATAAAATATC
AACCCAATAAAATTCG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ATAAAATATC
GTCATAAAAN---
 A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ATAAAATATC
NCYAATAAAA----
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATAAAATATC
CCAATAAAAA---
 A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATAAAATATC
GCAATAAAA----
 A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ATAAAATATC
AAGCCATAAAA----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ATAAAATATC
CCYMATAAAA----
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATAAAATATC
GGTAATAAAAA---
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T