Information for 14-ACGCCTTCAAAAACAA (Motif 21)

C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T C T A G A C G T A G C T C A G T A C G T A C G T A C T G G T C A C G T A A C T G A C T G G T A C A T C G A G C T
p-value:1e-6
log p-value:-1.443e+01
Information Content per bp:1.899
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.2 +/- 13.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ACGCCTTCAAAAACAA-----
----GTTAAAAAAAAAAATTA
 C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACGCCTTCAAAAACAA
-CGGTTTCAAA-----
 C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACGCCTTCAAAAACAA-----
----GTTCAAAAAAAAAATTC
 C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACGCCTTCAAAAACAA---
----AACAAACAACAAGAG
 C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACGCCTTCAAAAACAA-----
-NNCCTGNAAAAAAAAAAAAA
 C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ACGCCTTCAAAAACAA-----
-NNCCTGNAAAAAAAAAAAAA
 C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------ACGCCTTCAAAAACAA
NNGGCCACGCCTTTN-------
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ACGCCTTCAAAAACAA-----
-----NNTNANAACAATTNNA
 C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ACGCCTTCAAAAACAA----------
----AATAAAGAACAATAGAATTTCA
 C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:ACGCCTTCAAAAACAA---
---------RNAACAATGG
 C T G A A T G C A C T G A G T C A G T C A C G T A C G T A G T C C G T A C G T A G T C A C T G A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G