Information for 6-CCAAACGGCT (Motif 7)

A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T
Reverse Opposite:
C G T A C T A G A G T C A G T C A C T G A C G T A C G T C G A T A C T G A C T G
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.877
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif22.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets57.9 +/- 33.9bp
Average Position of motif in Background65.1 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCAAACGGCT-
-NHAACBGYYV
 A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T A C G T
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCAAACGGCT-
CCGCCCAAGGGCAG
 A C G T A C G T A C G T A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCAAACGGCT
AGCCAATCGG--
 A C G T A C G T A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCAAACGGCT-----
NNANTAACGGTTNNNAN
 A C G T A C G T A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAAACGGCT
CCAGACAG--
 A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCAAACGGCT----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAAACGGCT-----
NNNNTAACGGTTNNNAN
 A C G T A C G T A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAAACGGCT
CCAGACRSVB
 A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCAAACGGCT-
-CCAACTGCCA
 A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T A C G T
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CCAAACGGCT
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A G T C A G T C A A G T C A C T G A C T G A G T C C G A T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T