Information for 3-TCAAACCACA (Motif 4)

G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A
Reverse Opposite:
A C G T A C T G A C G T A C T G C T A G A C G T C G A T A C G T T C A G C G T A
p-value:1e-17
log p-value:-3.918e+01
Information Content per bp:1.862
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif87.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets45.0 +/- 20.3bp
Average Position of motif in Background56.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.89
Offset:2
Orientation:forward strand
Alignment:TCAAACCACA--
--AAACCACANN
 G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.89
Offset:1
Orientation:forward strand
Alignment:TCAAACCACA-
-NAAACCACAG
 G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:TCAAACCACA---
--AAACCACAGAN
 G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.85
Offset:1
Orientation:forward strand
Alignment:TCAAACCACA---
-NWAACCACADNN
 G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:TCAAACCACA--
--AAACCACAGC
 G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.79
Offset:2
Orientation:forward strand
Alignment:TCAAACCACA--
--AAACCGCAAA
 G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TCAAACCACA-
--AAACCGCAA
 G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TCAAACCACA
TCCAATCCACA
 A C G T G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCAAACCACA--
SSAATCCACANN
 G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCAAACCACA
CNGTCACGCCAC-
 A C G T A C G T A C G T G C A T A G T C C G T A C G T A C G T A A G T C A G T C G T C A A G T C G T C A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T