Information for 10-GACSTGACTA (Motif 13)

A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A
Reverse Opposite:
A G C T C G T A A C T G A C G T A G T C C G T A A T G C A C T G A C G T A G T C
p-value:1e-5
log p-value:-1.322e+01
Information Content per bp:1.898
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 22.4bp
Average Position of motif in Background35.5 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GACSTGACTA
-NCGTGACN-
 A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACSTGACTA
NCACGTGACN-
 A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GACSTGACTA
CGGTGACGTCAC--
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GACSTGACTA
GTCACGTGAC--
 A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACSTGACTA
ATCACGTGAC--
 A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACSTGACTA
GCCACGTGACC-
 A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

CREB3/MA0638.1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GACSTGACTA
NGATGACGTGGCAN
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GACSTGACTA
TACGTGCV--
 A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACSTGACTA
GTCACGTGACYV
 A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A
T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

XBP1/MA0844.1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GACSTGACTA-
GATGACGTGGCANT
 A C G T A C G T A C G T A C T G C G T A A G T C A T C G A C G T A C T G C G T A A G T C C G A T C T G A A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T