Information for 4-AAGHCGGGGCTTTCCC (Motif 5)

C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C
Reverse Opposite:
C T A G T C A G C T A G C T G A C G T A C G T A A C T G G T A C A G T C A T G C G A T C A C T G C T A G A G T C A C G T A G C T
p-value:1e-13
log p-value:-3.120e+01
Information Content per bp:1.773
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.4 +/- 20.2bp
Average Position of motif in Background51.4 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AAGHCGGGGCTTTCCC
-----GGGGATTTCC-
 C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AAGHCGGGGCTTTCCC
----NGGGGATTTCCC
 C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AAGHCGGGGCTTTCCC
-----GGGGATTTCC-
 C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAGHCGGGGCTTTCCC
-----GGGAATTTCC-
 C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGHCGGGGCTTTCCC
-AGAAATGACTTCCCT
 C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C
A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AAGHCGGGGCTTTCCC-
-----GGGGATTCCCCC
 C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AAGHCGGGGCTTTCCC-
----AGGGGATTCCCCT
 C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AAGHCGGGGCTTTCCC-
RRCATGYCHGGACWTGYYYN
 A C G T A C G T A C G T C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C A C G T
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AAGHCGGGGCTTTCCC----
--------ACTTTCACTTTC
 C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAGHCGGGGCTTTCCC
ATGCCCGGGCATGT--
 C T G A C G T A A C T G G A C T G T A C C T A G A T C G A C T G A C T G A G T C A C G T A C G T A G C T A G T C A G T C A G T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T