Information for 11-GCTGATTGTGTGC (Motif 17)

A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C
Reverse Opposite:
T A C G G T A C C T G A A T G C G T C A A G T C C G T A G T C A C A G T A G T C G T C A T A C G G T A C
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.703
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif89.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets38.9 +/- 25.8bp
Average Position of motif in Background47.3 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCTGATTGTGTGC----
-NNGCGTGTGTGCNGCN
 A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCTGATTGTGTGC----
-NNNNTTGTGTGCTTNN
 A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCTGATTGTGTGC
-TTGATTGN----
 A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCTGATTGTGTGC
-----TWGTCTGV
 A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCTGATTGTGTGC
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTGATTGTGTGC
---VBSYGTCTGG
 A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCTGATTGTGTGC
-----CTGTCTGG
 A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTGATTGTGTGC
--TGCGTGGGYG-
 A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C
A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTGATTGTGTGC----
--CCATTGTATGCAAAT
 A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

NFYA/MA0060.2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCTGATTGTGTGC
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C A G T T A C G G T C A C A G T C G A T C T A G A C G T A T C G A G C T A C T G A T G C
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A