Information for 6-GKCACTTGCG (Motif 15)

C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G
Reverse Opposite:
A T G C T C A G T A G C C T G A C G T A A C T G A C G T A T C G T G C A G A T C
p-value:1e-10
log p-value:-2.442e+01
Information Content per bp:1.656
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif593.8
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets54.3 +/- 26.9bp
Average Position of motif in Background46.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GKCACTTGCG
-CCACTTGAA
 C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GKCACTTGCG--
-NNACTTGCCTT
 C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GKCACTTGCG
ACCACTTGAA
 C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

ETV6/MA0645.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GKCACTTGCG--
--CACTTCCGCT
 C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G A C G T A C G T
A C G T A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GKCACTTGCG-
NCCACTTCCGG
 C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G A C G T
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GKCACTTGCG
MRSCACTYAA-
 A C G T C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GKCACTTGCG
RSCACTYRAG
 C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

ETS(ETS)/Promoter/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GKCACTTGCG---
---ACTTCCGGTT
 C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T

ELK1/MA0028.2/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GKCACTTGCG--
--NACTTCCGGT
 C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G A C G T A C G T
A C G T A C G T G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T

ELF4/MA0641.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GKCACTTGCG----
--CACTTCCGGGTT
 C T A G A C G T T A G C G T C A A G T C A C G T G A C T A T C G A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T