Information for 5-AGTAATGATTCAT (Motif 6)

G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T
Reverse Opposite:
C G T A G A C T T C A G G C T A G C T A A C G T T G A C G C T A C G A T C G A T C G T A G T A C A C G T
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.677
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif160.9
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets51.1 +/- 26.1bp
Average Position of motif in Background50.6 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F1/MA0790.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AGTAATGATTCAT
CATTAATTATTCAT
 A C G T G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---AGTAATGATTCAT
CTCATTAATTATGCAT
 A C G T A C G T A C G T G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

POU4F2/MA0683.1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AGTAATGATTCAT
CTCATTAATTATGCAT
 A C G T A C G T A C G T G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

PH0132.1_Pax6/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AGTAATGATTCAT
GNNAATTAATTAATCA-
 A C G T A C G T A C G T A C G T G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A A C G T

PH0019.1_Dbx2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AGTAATGATTCAT
TTTAATTAATTAATTC-
 A C G T A C G T A C G T A C G T G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C A C G T

JDP2/MA0655.1/Jaspar

Match Rank:6
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AGTAATGATTCAT
----ATGAGTCAT
 G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T

Hoxd8/MA0910.1/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----AGTAATGATTCAT
NAGCCATTAATTANTTA-
 A C G T A C G T A C G T A C G T A C G T G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A A C G T

PH0080.1_Hoxd8/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----AGTAATGATTCAT
NAGCCATTAATTANTTA-
 A C G T A C G T A C G T A C G T A C G T G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGTAATGATTCAT-
--NNATGASTCATH
 G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T A C G T
A C G T A C G T A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

PH0008.1_Barx2/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGTAATGATTCAT-
TAAGTAATTAGTTATA
 A C G T A C G T G T C A A C T G C G A T G C T A G C T A C G A T A C T G G T C A C G A T C A G T A G T C C T G A C G A T A C G T
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A