Information for 3-CTRTGAWRTGTTR (Motif 4)

A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
Reverse Opposite:
A G C T C G T A C G T A A G T C C G T A A G T C C G A T A G C T A G T C C G T A A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.626e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 26.4bp
Average Position of motif in Background64.8 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTRTGAWRTGTTR
CCTTTGATGT----
 A C G T A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTRTGAWRTGTTR
CCTTTGAWGT----
 A C G T A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTRTGAWRTGTTR
TNCCTTTGATCTTN--
 A C G T A C G T A C G T A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTRTGAWRTGTTR
TNCCTTTGATGT----
 A C G T A C G T A C G T A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTRTGAWRTGTTR
CCTTTGATCTTT--
 A C G T A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTRTGAWRTGTTR
ATTTCCTTTGATCTATA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTRTGAWRTGTTR
NNTTCCTTTGATCTANA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTRTGAWRTGTTR
AATCCCTTTGATCTATC-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C A C G T

SOX8/MA0868.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTRTGAWRTGTTR
AACAATGTGCAGTGTT-
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTRTGAWRTGTTR
AACCCTTTGATCTTT--
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C G T A C T G C T G A C G T A C T A G A C G T C T A G A C G T A C G T C T G A
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T