Information for 11-CGCGGCTTTT (Motif 33)

A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G
p-value:1e-4
log p-value:-1.066e+01
Information Content per bp:1.886
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 33.8bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGCGGCTTTT---
TTTTACGACTTTCCAT
 A C G T A C G T A C G T A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGCTTTT---
GGNGCGNCTGTTNNN
 A C G T A C G T A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCTTTT-
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C G T A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGCGGCTTTT
-TTGACTTTT
 A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCTTTT-
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C G T A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGCGGCTTTT
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A C G T A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGCGGCTTTT------
----CCTTTTATAGNC
 A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGCTTTT----
NNNNNNCTTTTATAN
 A C G T A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGCTTTT----
NNNNNNCTTTTATAN
 A C G T A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CGCGGCTTTT
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C G T A C G T A G T C T C A G A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T