Information for 8-GGTTAGTTAG (Motif 31)

A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G
Reverse Opposite:
A G T C A C G T C G T A C T G A A G T C A C G T G T C A C G T A A G T C A G T C
p-value:1e-5
log p-value:-1.206e+01
Information Content per bp:1.901
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif340.8
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets51.2 +/- 27.5bp
Average Position of motif in Background52.9 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGTTAGTTAG-
-ACTAGTTAAC
 A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

mix-a/MA0621.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGTTAGTTAG-
AATTAATTAGT
 A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G A C G T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAGTTAG-----
ANNNCTAGTTAACNGNN
 A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0131.1_Pax4/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGTTAGTTAG----
NNGNGCTAATTAGNTNA
 A C G T A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G A C G T A C G T A C G T A C G T
C A T G G A C T A T C G T C A G C T A G A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G C A T A G C T A T G C C G T A

PB0081.1_Tcf1_1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGTTAGTTAG------
NNNTTAGTTAACTNANN
 A C G T A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGTTAGTTAG------
NTTTTAGTTAACNNAGN
 A C G T A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

LHX2/MA0700.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGTTAGTTAG-
-NNTAATTAGN
 A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G A C G T
A C G T T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T

PH0036.1_Gsx2/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTTAGTTAG-----
AGGTTAATTAGCTGAT
 A C G T A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTTAGTTAG
CAGGTAAGTAT-
 A C G T A C G T A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

PH0174.1_Vax1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGTTAGTTAG-----
ACGTTAATTAACCCAG
 A C G T A C T G C T A G A C G T A C G T C G T A A C T G A G C T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T C A G C G A T G A C T G T C A G C T A C G A T C A G T C T G A T C G A A G T C G A T C G A T C C G T A C T A G