Information for 9-TCTTCCATTGTCA (Motif 15)

A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C C G T A C T G A C G A T A C T G A C T G C G T A C G T A A C T G C G T A
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.947
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.3 +/- 24.9bp
Average Position of motif in Background69.2 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TCTTCCATTGTCA
----CCTTTGTT-
 A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TCTTCCATTGTCA
---CTCATTGTC-
 A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TCTTCCATTGTCA
----CCWTTGTY-
 A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TCTTCCATTGTCA-
----CCATTGTTYB
 A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCTTCCATTGTCA
---NCCATTGTTC
 A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TCTTCCATTGTCA-
----CCWTTGTYYB
 A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TCTTCCATTGTCA-
----CCATTGTTTT
 A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCTTCCATTGTCA
---NCCATTGTTY
 A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:TCTTCCATTGTCA-
-------NTGTCAN
 A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCTTCCATTGTCA---
TGTTCCCATTGTGTACT
 A C G T A C G T G T A C A C G T A C G T A G T C A G T C C G T A A G C T A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T