Information for 3-AYACCATCCTGACCWT (Motif 6)

C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T
Reverse Opposite:
T C G A C G T A C A T G A T C G C G A T G A T C C G T A C A T G C T A G G C T A G A C T C T A G A T C G A C G T C T A G C G A T
p-value:1e-9
log p-value:-2.116e+01
Information Content per bp:1.649
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif30.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets35.2 +/- 18.8bp
Average Position of motif in Background45.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:8
Orientation:forward strand
Alignment:AYACCATCCTGACCWT--
--------NTGACCTTGA
 C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:AYACCATCCTGACCWT--
--------ATGACCTTGA
 C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AYACCATCCTGACCWT-----
-----NNNNTGACCTTTNNNN
 C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.62
Offset:9
Orientation:forward strand
Alignment:AYACCATCCTGACCWT-----
---------TGACCTTTNCNT
 C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.61
Offset:9
Orientation:reverse strand
Alignment:AYACCATCCTGACCWT---
---------TGACCTTGAT
 C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.61
Offset:9
Orientation:reverse strand
Alignment:AYACCATCCTGACCWT
---------TGACCT-
 C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:AYACCATCCTGACCWT-
---------TGACCTYA
 C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:AYACCATCCTGACCWT--
--------CTGACCTTTG
 C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AYACCATCCTGACCWT-----
----NNNNATGACCTTGANTN
 C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:AYACCATCCTGACCWT-
---------TGACCYCT
 C G T A G A T C G T C A T A G C G A T C C G T A C A G T A G T C G T A C A C G T C T A G C G T A A T G C G T A C C G A T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T