Information for 1-TSTAGAAKCTHCW (Motif 3)

A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A
Reverse Opposite:
C G A T C T A G C A T G C G T A C T A G G T C A G A C T A G C T T A G C A G C T C G T A A T G C C G T A
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.644
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif267.6
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets48.1 +/- 16.7bp
Average Position of motif in Background50.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TSTAGAAKCTHCW-
TTCTAGAABNTTCTA
 A C G T A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HSF2/MA0770.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TSTAGAAKCTHCW
TTCTAGAACGTTC-
 A C G T A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TSTAGAAKCTHCW
TTCTAGAACGTTC-
 A C G T A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TSTAGAAKCTHCW
TTCTAGAACGTTC-
 A C G T A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TSTAGAAKCTHCW------
TTCTAGAANNTTCCAGAANN
 A C G T A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TSTAGAAKCTHCW
NNGATCTAGAACCTNNN
 A C G T A C G T A C G T A C G T A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TSTAGAAKCTHCW
NGNTCTAGAACCNGV-
 A C G T A C G T A C G T A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TSTAGAAKCTHCW
-NTGGAATGTN--
 A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A
A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TSTAGAAKCTHCW
--GGGAATTTCC-
 A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TSTAGAAKCTHCW
NCTGGAATGC---
 A C G T T A C G C G A T T C G A A T C G C T G A C T G A A C G T G A T C G A C T G T A C G A T C C G T A
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T